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  5. Solyc04g056320.3.1

Solyc04g056320.3.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0001722 (Archaeplastida) Phylogenetic Tree(s): OG0001722_tree ,
OG_05_0001208 (LandPlants) Phylogenetic Tree(s): OG_05_0001208_tree ,
OG_06_0003750 (SeedPlants) Phylogenetic Tree(s): OG_06_0003750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g056320.3.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00061590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT1G34370 STOP1 C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G22890 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
GSVIVT01004847001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
LOC_Os08g44830.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_2352237g0010 No alias No annotation 0.04 Archaeplastida
Zm00001e019129_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e028659_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!