Solyc04g070960.3.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0009080 (SeedPlants) Phylogenetic Tree(s): OG_06_0009080_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g070960.3.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00169p00055880 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.04 Archaeplastida
AT3G52440 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Gb_09675 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_20130 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os06g17410.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os09g29960.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os10g35300.2 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.02 Archaeplastida
Pp3c4_850V3.1 No alias cycling DOF factor 3 0.05 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.04 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 22 78
No external refs found!