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  5. Solyc04g071265.1.1

Solyc04g071265.1.1


Description : no hits & (original description: none)


Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0001378 (SeedPlants) Phylogenetic Tree(s): OG_06_0001378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g071265.1.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G27110 FRS3 FAR1-related sequence 3 0.02 Archaeplastida
GSVIVT01029436001 No alias RNA biosynthesis.transcriptional activation.FAR1... 0.02 Archaeplastida
LOC_Os11g45530.1 No alias transcription factor (FAR1) 0.01 Archaeplastida
Solyc06g065940.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!