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  5. AMTR_s00025p00048410

AMTR_s00025p00048410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.26

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0002624 (Archaeplastida) Phylogenetic Tree(s): OG0002624_tree ,
OG_05_0002177 (LandPlants) Phylogenetic Tree(s): OG_05_0002177_tree ,
OG_06_0001598 (SeedPlants) Phylogenetic Tree(s): OG_06_0001598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00048410
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT5G41315 MYC6.2, GL3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Gb_19402 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_32265 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os04g47040.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_96585g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g065100.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 30 212
IPR011598 bHLH_dom 490 536
No external refs found!