Solyc04g072150.3.1

Description : Pentatricopeptide repeat-containing protein At4g17616 OS=Arabidopsis thaliana (sp|b3h672|pp317_arath : 556.0)

Gene families : OG0001060 (Archaeplastida) Phylogenetic Tree(s): OG0001060_tree ,
OG_05_0001470 (LandPlants) Phylogenetic Tree(s): OG_05_0001470_tree ,
OG_06_0012025 (SeedPlants) Phylogenetic Tree(s): OG_06_0012025_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g072150.3.1
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01002606001	No alias	No description available	0.06	Archaeplastida
Zm00001e012797_P004	No alias	Pentatricopeptide repeat-containing protein At1g03100,...	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	476	505

External Links

No external refs found!