Description : Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana (sp|q9fx24|ppr71_arath : 684.0)
Gene families : OG0012179 (Archaeplastida) Phylogenetic Tree(s): OG0012179_tree ,
OG_05_0012109 (LandPlants) Phylogenetic Tree(s): OG_05_0012109_tree ,
OG_06_0012203 (SeedPlants) Phylogenetic Tree(s): OG_06_0012203_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g072170.1.1 | |
Cluster | HCCA: Cluster_207 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G34160 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01013673001 | No alias | Pentatricopeptide repeat-containing protein At1g34160... | 0.05 | Archaeplastida | |
LOC_Os12g17080.1 | No alias | Pentatricopeptide repeat-containing protein OGR1,... | 0.05 | Archaeplastida | |
Zm00001e042519_P001 | No alias | Pentatricopeptide repeat-containing protein OGR1,... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 342 | 366 |
IPR002885 | Pentatricopeptide_repeat | 239 | 265 |
IPR002885 | Pentatricopeptide_repeat | 140 | 165 |
IPR002885 | Pentatricopeptide_repeat | 69 | 94 |
IPR002885 | Pentatricopeptide_repeat | 270 | 313 |
IPR002885 | Pentatricopeptide_repeat | 166 | 212 |
IPR032867 | DYW_dom | 440 | 564 |
No external refs found! |