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  5. Solyc04g074160.3.1

Solyc04g074160.3.1


Description : Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana (sp|o49287|pp127_arath : 701.0)


Gene families : OG0024419 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0013527 (LandPlants) Phylogenetic Tree(s): OG_05_0013527_tree ,
OG_06_0027406 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074160.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
MA_10293513g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 73 102
IPR002885 Pentatricopeptide_repeat 135 162
IPR002885 Pentatricopeptide_repeat 215 238
IPR002885 Pentatricopeptide_repeat 406 435
IPR002885 Pentatricopeptide_repeat 104 133
IPR002885 Pentatricopeptide_repeat 579 603
IPR002885 Pentatricopeptide_repeat 347 371
IPR002885 Pentatricopeptide_repeat 244 267
IPR002885 Pentatricopeptide_repeat 45 72
IPR002885 Pentatricopeptide_repeat 378 401
IPR002885 Pentatricopeptide_repeat 271 319
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 479 501
No external refs found!