Solyc04g074700.4.1

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g074700.4.1
Cluster	HCCA: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00253290	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00040p00235500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AT2G18550	ATHB21, HB21, HB-2	homeobox protein 21	0.02	Archaeplastida
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.04	Archaeplastida
AT5G65310	ATHB5, ATHB-5, HB5	homeobox protein 5	0.03	Archaeplastida
AT5G66700	ATHB53, HB53, HB-8	homeobox 53	0.02	Archaeplastida
GSVIVT01019012001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_04698	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Gb_20878	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os03g07450.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os07g39320.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os08g32080.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os08g32085.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os09g35910.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g26500.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_10428916g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_19453g0050	No alias	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.03	Archaeplastida
Pp3c11_23440V3.1	No alias	homeobox 1	0.03	Archaeplastida
Pp3c17_18190V3.1	No alias	homeobox protein 16	0.03	Archaeplastida
Pp3c1_37070V3.1	No alias	homeobox protein 16	0.05	Archaeplastida
Pp3c25_13450V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.04	Archaeplastida
Pp3c7_2100V3.1	No alias	Homeobox-leucine zipper protein family	0.03	Archaeplastida
Smo18217	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Smo81609	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Solyc01g010600.4.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc02g062960.4.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Solyc08g083130.4.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc09g008810.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc10g150101.1.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e000532_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e000659_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e010004_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e012829_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e034785_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	54	106
IPR003106	Leu_zip_homeo	108	149

External Links

No external refs found!

Solyc04g074700.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation