- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : transcription factor (bHLH). transcriptional regulator (CIB)
Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g077480.3.1 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00267570 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AMTR_s00022p00228970 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| AMTR_s00065p00184910 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| AT1G10120 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT1G25330 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT1G51140 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| AT2G42300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT5G58010 | LRL3 | LJRHL1-like 3 | 0.03 | Archaeplastida | |
| GSVIVT01000717001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| GSVIVT01010126001 | No alias | External stimuli response.light.UV-A/blue... | 0.04 | Archaeplastida | |
| GSVIVT01013553001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| GSVIVT01021787001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.05 | Archaeplastida | |
| GSVIVT01026056001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| GSVIVT01032055001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Gb_07446 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Gb_20300 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Gb_28850 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Gb_36369 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Gb_40829 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os01g67480.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| LOC_Os01g68700.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| LOC_Os02g55250.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os03g58330.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os03g58830.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| LOC_Os08g38080.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| LOC_Os08g39630.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os09g25040.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| LOC_Os11g25560.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| MA_158362g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| MA_158850g0010 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| MA_42080g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | Archaeplastida | |
| MA_90272g0010 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Pp3c16_7710V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | Archaeplastida | |
| Pp3c1_33270V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Pp3c5_18850V3.1 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| Smo24892 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Smo402301 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | Archaeplastida | |
| Solyc02g062690.3.1 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida | |
| Zm00001e009823_P002 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| Zm00001e010540_P001 | No alias | transcription factor (bHLH) | 0.05 | Archaeplastida | |
| Zm00001e011866_P002 | No alias | transcription factor (bHLH) | 0.08 | Archaeplastida | |
| Zm00001e012110_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| Zm00001e018857_P002 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.08 | Archaeplastida | |
| Zm00001e018946_P001 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e021418_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e028489_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | Archaeplastida | |
| Zm00001e030519_P003 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | Archaeplastida | |
| Zm00001e032950_P002 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Zm00001e034528_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e036261_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e036318_P001 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida | |
| Zm00001e037598_P001 | No alias | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| MF | GO:0003883 | CTP synthase activity | IEP | Neighborhood |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 225 | 273 |
| No external refs found! |