Description : no hits & (original description: none)
Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0005277 (SeedPlants) Phylogenetic Tree(s): OG_06_0005277_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g077510.4.1 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00250840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | Archaeplastida | |
AMTR_s00040p00189460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.09 | Archaeplastida | |
AMTR_s00065p00092420 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.1 | Archaeplastida | |
AMTR_s00069p00196720 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
AT2G06200 | GRF6, AtGRF6 | growth-regulating factor 6 | 0.03 | Archaeplastida | |
AT2G36400 | GRF3, AtGRF3 | growth-regulating factor 3 | 0.04 | Archaeplastida | |
AT3G13960 | GRF5, AtGRF5 | growth-regulating factor 5 | 0.12 | Archaeplastida | |
AT4G37740 | GRF2, AtGRF2 | growth-regulating factor 2 | 0.07 | Archaeplastida | |
GSVIVT01009299001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.09 | Archaeplastida | |
GSVIVT01015095001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.15 | Archaeplastida | |
GSVIVT01016762001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.05 | Archaeplastida | |
GSVIVT01019667001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
GSVIVT01019913001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.03 | Archaeplastida | |
GSVIVT01024326001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.16 | Archaeplastida | |
GSVIVT01027535001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.01 | Archaeplastida | |
GSVIVT01033800001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.07 | Archaeplastida | |
GSVIVT01038629001 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.04 | Archaeplastida | |
Gb_05477 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Gb_19288 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Gb_20400 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Gb_20443 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Gb_26136 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
LOC_Os02g45570.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.09 | Archaeplastida | |
LOC_Os02g47280.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
LOC_Os02g53690.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
LOC_Os03g47140.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
LOC_Os03g51970.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
LOC_Os04g48510.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
LOC_Os04g51190.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.02 | Archaeplastida | |
LOC_Os06g02560.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
LOC_Os11g35030.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
LOC_Os12g29980.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.09 | Archaeplastida | |
MA_111469g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.08 | Archaeplastida | |
MA_137877g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
MA_18836g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.08 | Archaeplastida | |
MA_33661g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
MA_88101g0010 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
Mp8g16900.1 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida | |
Pp3c12_3720V3.1 | No alias | growth-regulating factor 2 | 0.03 | Archaeplastida | |
Pp3c17_1780V3.1 | No alias | growth-regulating factor 2 | 0.05 | Archaeplastida | |
Smo442384 | No alias | RNA biosynthesis.transcriptional activation.GRF-GIF... | 0.02 | Archaeplastida | |
Zm00001e005165_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
Zm00001e011207_P003 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Zm00001e012104_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Zm00001e015436_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.07 | Archaeplastida | |
Zm00001e015561_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Zm00001e023769_P003 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Zm00001e029851_P005 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Zm00001e030774_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.06 | Archaeplastida | |
Zm00001e036224_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.05 | Archaeplastida | |
Zm00001e036657_P001 | No alias | component GRF of GRF-GIF transcriptional complex | 0.04 | Archaeplastida | |
Zm00001e041573_P002 | No alias | component GRF of GRF-GIF transcriptional complex | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint | IEP | Neighborhood |
BP | GO:0000077 | DNA damage checkpoint | IEP | Neighborhood |
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0031570 | DNA integrity checkpoint | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |