Solyc04g077520.3.1

Description : RNA-binding protein 1 OS=Arabidopsis thaliana (sp|q9c652|rbp1_arath : 216.0)

Gene families : OG0000233 (Archaeplastida) Phylogenetic Tree(s): OG0000233_tree ,
OG_05_0000415 (LandPlants) Phylogenetic Tree(s): OG_05_0000415_tree ,
OG_06_0000490 (SeedPlants) Phylogenetic Tree(s): OG_06_0000490_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g077520.3.1
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AT1G58470	RBP1, ATRBP1	RNA-binding protein 1	0.03	Archaeplastida
AT3G13224	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Archaeplastida
MA_473g0010	No alias	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	117	174
IPR000504	RRM_dom	9	71

External Links

No external refs found!