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  4. Sequence
  5. Solyc04g077630.3.1

Solyc04g077630.3.1


Description : no hits & (original description: none)


Gene families : OG0000366 (Archaeplastida) Phylogenetic Tree(s): OG0000366_tree ,
OG_05_0001739 (LandPlants) Phylogenetic Tree(s): OG_05_0001739_tree ,
OG_06_0000946 (SeedPlants) Phylogenetic Tree(s): OG_06_0000946_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077630.3.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00227730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AMTR_s00163p00053930 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AT1G33540 scpl18 serine carboxypeptidase-like 18 0.03 Archaeplastida
AT1G73270 scpl6 serine carboxypeptidase-like 6 0.03 Archaeplastida
AT1G73280 scpl3 serine carboxypeptidase-like 3 0.04 Archaeplastida
AT1G73290 scpl5 serine carboxypeptidase-like 5 0.05 Archaeplastida
AT1G73300 scpl2 serine carboxypeptidase-like 2 0.04 Archaeplastida
AT3G12230 scpl14 serine carboxypeptidase-like 14 0.05 Archaeplastida
AT3G12240 SCPL15 serine carboxypeptidase-like 15 0.04 Archaeplastida
AT3G25420 scpl21 serine carboxypeptidase-like 21 0.05 Archaeplastida
AT4G12910 scpl20 serine carboxypeptidase-like 20 0.03 Archaeplastida
GSVIVT01019073001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01029225001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01029226001 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
GSVIVT01037071001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01037078001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
LOC_Os03g52070.3 No alias serine carboxypeptidase 0.05 Archaeplastida
LOC_Os03g52080.1 No alias serine carboxypeptidase 0.01 Archaeplastida
LOC_Os04g25560.1 No alias serine carboxypeptidase 0.03 Archaeplastida
LOC_Os10g01134.1 No alias serine carboxypeptidase 0.03 Archaeplastida
LOC_Os11g24374.1 No alias serine carboxypeptidase 0.04 Archaeplastida
LOC_Os11g27170.1 No alias serine carboxypeptidase 0.04 Archaeplastida
LOC_Os11g27264.2 No alias serine carboxypeptidase 0.02 Archaeplastida
LOC_Os12g15470.1 No alias serine carboxypeptidase 0.02 Archaeplastida
Solyc05g050780.3.1 No alias serine carboxypeptidase 0.05 Archaeplastida
Solyc12g088250.2.1 No alias serine carboxypeptidase 0.01 Archaeplastida
Zm00001e009554_P001 No alias serine carboxypeptidase 0.03 Archaeplastida
Zm00001e013009_P001 No alias serine carboxypeptidase 0.03 Archaeplastida
Zm00001e033395_P002 No alias serine carboxypeptidase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!