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  5. Solyc04g077960.1.1

Solyc04g077960.1.1


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077960.1.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.14 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.04 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.05 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.1 Archaeplastida
AT5G01305 No alias No description available 0.02 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_30387 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_30839 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g51140.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g30090.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.1 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_78485g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.07 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp3g17930.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.07 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Smo409967 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
Smo418491 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Smo419388 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g102300.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.11 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.11 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e040380_P002 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 280 320
No external refs found!