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  5. Solyc04g078430.3.1

Solyc04g078430.3.1


Description : Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana (sp|q8l9j9|caes_arath : 224.0)


Gene families : OG0001666 (Archaeplastida) Phylogenetic Tree(s): OG0001666_tree ,
OG_05_0034892 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0031733 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078430.3.1
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT3G53010 No alias Domain of unknown function (DUF303) 0.03 Archaeplastida
GSVIVT01009427001 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os03g64050.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR005181 SASA 39 279
No external refs found!