Solyc04g078640.3.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001540 (SeedPlants) Phylogenetic Tree(s): OG_06_0001540_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g078640.3.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00135920	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00115p00032780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00129p00119770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G22985	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G46768	RAP2.1	related to AP2 1	0.03	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT1G80580	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G38340	DREB19	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	Archaeplastida
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.03	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	Archaeplastida
AT3G50260	DEAR1, CEJ1, ATERF#011	cooperatively regulated by ethylene and jasmonate 1	0.04	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.06	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.05	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
AT4G36900	DEAR4, RAP2.10	related to AP2 10	0.05	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G21960	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.05	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013935001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01020584001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01021098001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01030515001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	Archaeplastida
GSVIVT01031747001	No alias	Alpha-amylase type B isozyme OS=Hordeum vulgare	0.05	Archaeplastida
GSVIVT01034563001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01035502001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24326	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_32806	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_36622	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os01g54890.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g06330.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g09650.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g32140.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g34970.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os06g07030.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os07g42510.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os08g45110.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os09g13940.2	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os10g41330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_108992g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_168025g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_23271g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4032g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_4072g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_436575g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_81029g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_844983g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp6g18650.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo38500	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Smo73155	No alias	Ethylene-responsive transcription factor ERF013...	0.05	Archaeplastida
Solyc01g009440.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc02g077840.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc05g052050.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g082590.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007352_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e013096_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e017516_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
Zm00001e023870_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e024669_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e030279_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e033072_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e038888_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041533_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e041539_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e041781_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0007034	vacuolar transport	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	17	65

External Links

No external refs found!

Solyc04g078640.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation