Solyc04g079830.2.1

Description : transcription factor (BEL)

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0001991 (SeedPlants) Phylogenetic Tree(s): OG_06_0001991_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g079830.2.1
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00262320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.04	Archaeplastida
AMTR_s00002p00243900	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
AMTR_s00030p00173920	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AMTR_s00059p00164750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
AT1G19700	BEL10, BLH10	BEL1-like homeodomain 10	0.02	Archaeplastida
AT1G75430	BLH11	BEL1-like homeodomain 11	0.02	Archaeplastida
AT2G27220	BLH5	BEL1-like homeodomain 5	0.03	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.06	Archaeplastida
AT4G32980	ATH1	homeobox gene 1	0.03	Archaeplastida
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.03	Archaeplastida
AT5G41410	BEL1	POX (plant homeobox) family protein	0.05	Archaeplastida
GSVIVT01009633001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
GSVIVT01019043001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
GSVIVT01019399001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
Gb_22513	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os03g06930.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os06g01934.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os10g39030.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os11g06020.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os12g06340.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
MA_28447g0010	No alias	transcription factor (BEL)	0.02	Archaeplastida
Mp5g11060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c13_7150V3.1	No alias	BEL1-like homeodomain 6	0.03	Archaeplastida
Pp3c15_11880V3.1	No alias	BEL1-like homeodomain 7	0.02	Archaeplastida
Smo80869	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Zm00001e000177_P001	No alias	transcription factor (BEL)	0.04	Archaeplastida
Zm00001e000495_P001	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e003327_P001	No alias	transcription factor (BEL)	0.05	Archaeplastida
Zm00001e005579_P001	No alias	transcription factor (BEL)	0.02	Archaeplastida
Zm00001e024626_P004	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e026923_P002	No alias	transcription factor (BEL)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004325	ferrochelatase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0006298	mismatch repair	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0006783	heme biosynthetic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0042168	heme metabolic process	IEP	Neighborhood
BP	GO:0042440	pigment metabolic process	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0046148	pigment biosynthetic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	490	529
IPR006563	POX_dom	290	420

External Links

No external refs found!

Solyc04g079830.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation