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  5. Solyc04g080080.3.1

Solyc04g080080.3.1


Description : arabinosyltransferase (RRA). extensin beta-1,2-arabinosyltransferase


Gene families : OG0002390 (Archaeplastida) Phylogenetic Tree(s): OG0002390_tree ,
OG_05_0003815 (LandPlants) Phylogenetic Tree(s): OG_05_0003815_tree ,
OG_06_0003882 (SeedPlants) Phylogenetic Tree(s): OG_06_0003882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080080.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre06.g288500 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Smo103279 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 183 401
No external refs found!