1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g080520.1.1

Solyc04g080520.1.1


Description : no hits & (original description: none)


Gene families : OG0003084 (Archaeplastida) Phylogenetic Tree(s): OG0003084_tree ,
OG_05_0002086 (LandPlants) Phylogenetic Tree(s): OG_05_0002086_tree ,
OG_06_0001140 (SeedPlants) Phylogenetic Tree(s): OG_06_0001140_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080520.1.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00238390 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AT1G63310 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 Archaeplastida
AT1G75260 No alias oxidoreductases, acting on NADH or NADPH 0.1 Archaeplastida
AT2G46630 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.1 Archaeplastida
GSVIVT01027399001 No alias No description available 0.04 Archaeplastida
GSVIVT01027401001 No alias No description available 0.03 Archaeplastida
Gb_06276 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36453 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36455 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g01680.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g01500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_281628g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g096250.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g067370.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e008811_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e017152_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e040498_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!