Solyc04g080630.4.1

Description : component psRPL31 of large ribosomal subunit proteome

Gene families : OG0006652 (Archaeplastida) Phylogenetic Tree(s): OG0006652_tree ,
OG_05_0007067 (LandPlants) Phylogenetic Tree(s): OG_05_0007067_tree ,
OG_06_0008588 (SeedPlants) Phylogenetic Tree(s): OG_06_0008588_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g080630.4.1
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
AT1G75350	emb2184	Ribosomal protein L31	0.19	Archaeplastida
Cre08.g365400	No alias	Protein biosynthesis.organelle translation...	0.11	Archaeplastida
GSVIVT01009748001	No alias	Protein biosynthesis.organelle translation...	0.03	Archaeplastida
LOC_Os01g44210.1	No alias	component psRPL31 of large ribosomal subunit proteome	0.04	Archaeplastida
MA_10430444g0010	No alias	component psRPL31 of large ribosomal subunit proteome	0.07	Archaeplastida
Mp7g17190.1	No alias	component psRPL31 of large ribosomal subunit proteome	0.18	Archaeplastida
Pp3c13_7030V3.1	No alias	Ribosomal protein L31	0.03	Archaeplastida
Pp3c3_430V3.1	No alias	Ribosomal protein L31	0.1	Archaeplastida
Pp3c4_22510V3.1	No alias	Ribosomal protein L31	0.12	Archaeplastida
Zm00001e020389_P001	No alias	component psRPL31 of large ribosomal subunit proteome	0.18	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
BP	GO:0006364	rRNA processing	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
CC	GO:0009523	photosystem II	IEP	Neighborhood
BP	GO:0016072	rRNA metabolic process	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002150	Ribosomal_L31	37	100

External Links

No external refs found!

Solyc04g080630.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation