Solyc04g080780.2.1

Description : transcription factor (BEL)

Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0012976 (SeedPlants) Phylogenetic Tree(s): OG_06_0012976_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g080780.2.1
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00165p00052010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
AT2G27990	BLH8, PNF	BEL1-like homeodomain 8	0.05	Archaeplastida
GSVIVT01035361001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
Gb_15916	No alias	transcription factor (BEL)	0.05	Archaeplastida
Gb_23074	No alias	transcription factor (BEL)	0.04	Archaeplastida
LOC_Os01g62920.1	No alias	transcription factor (BEL)	0.02	Archaeplastida
LOC_Os03g47730.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
LOC_Os05g38120.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
MA_76835g0010	No alias	transcription factor (BEL)	0.02	Archaeplastida
Smo80869	No alias	RNA biosynthesis.transcriptional activation.HB...	0.02	Archaeplastida
Solyc10g086640.3.1	No alias	transcription factor (BEL)	0.05	Archaeplastida
Solyc11g069890.3.1	No alias	transcription factor (BEL)	0.03	Archaeplastida
Zm00001e014436_P001	No alias	transcription factor (BEL)	0.04	Archaeplastida
Zm00001e019280_P001	No alias	transcription factor (BEL)	0.06	Archaeplastida
Zm00001e031812_P001	No alias	transcription factor (BEL)	0.05	Archaeplastida
Zm00001e037180_P001	No alias	transcription factor (BEL)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	325	364
IPR006563	POX_dom	126	256

External Links

No external refs found!