Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000516 (LandPlants) Phylogenetic Tree(s): OG_05_0000516_tree ,
OG_06_0000730 (SeedPlants) Phylogenetic Tree(s): OG_06_0000730_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g081240.2.1 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
AT2G33860 | ARF3, ETT | Transcriptional factor B3 family protein /... | 0.04 | Archaeplastida | |
GSVIVT01016266001 | No alias | Auxin response factor 18 OS=Oryza sativa subsp. japonica | 0.04 | Archaeplastida | |
LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os04g36054.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os04g56850.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os12g29520.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_85955g0020 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e013061_P001 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e021527_P006 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Zm00001e023038_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Neighborhood |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
No external refs found! |