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  5. AMTR_s00025p00120730

AMTR_s00025p00120730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.110

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase


Gene families : OG0000706 (Archaeplastida) Phylogenetic Tree(s): OG0000706_tree ,
OG_05_0000699 (LandPlants) Phylogenetic Tree(s): OG_05_0000699_tree ,
OG_06_0000774 (SeedPlants) Phylogenetic Tree(s): OG_06_0000774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00120730
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT1G66200 ATGSR2, GLN1;2, GSR2 glutamine synthase clone F11 0.03 Archaeplastida
MA_15508g0010 No alias cytosolic glutamine synthetase (GLN1) 0.02 Archaeplastida
Mp5g13580.1 No alias cytosolic glutamine synthetase (GLN1) 0.02 Archaeplastida
Mp6g06750.1 No alias cytosolic glutamine synthetase (GLN1) 0.03 Archaeplastida
Pp3c18_10760V3.1 No alias glutamine synthetase 1;4 0.02 Archaeplastida
Solyc04g014510.3.1 No alias cytosolic glutamine synthetase (GLN1) 0.02 Archaeplastida
Zm00001e005453_P003 No alias cytosolic glutamine synthetase (GLN1) 0.03 Archaeplastida
Zm00001e015749_P003 No alias cytosolic glutamine synthetase (GLN1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006542 glutamine biosynthetic process IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004357 glutamate-cysteine ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008147 Gln_synt_b-grasp 83 161
IPR008146 Gln_synth_cat_dom 168 413
No external refs found!