1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g082020.3.1

Solyc04g082020.3.1


Description : no hits & (original description: none)


Gene families : OG0002559 (Archaeplastida) Phylogenetic Tree(s): OG0002559_tree ,
OG_05_0002221 (LandPlants) Phylogenetic Tree(s): OG_05_0002221_tree ,
OG_06_0007379 (SeedPlants) Phylogenetic Tree(s): OG_06_0007379_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082020.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00142230 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT5G27280 No alias Zim17-type zinc finger protein 0.06 Archaeplastida
GSVIVT01008732001 No alias No description available 0.08 Archaeplastida
Gb_31453 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g50870.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp8g16780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013301_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030158_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007853 Znf_DNL-typ 124 173
No external refs found!