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  5. Solyc04g082240.1.1

Solyc04g082240.1.1


Description : no hits & (original description: none)


Gene families : OG0000630 (Archaeplastida) Phylogenetic Tree(s): OG0000630_tree ,
OG_05_0000349 (LandPlants) Phylogenetic Tree(s): OG_05_0000349_tree ,
OG_06_0000155 (SeedPlants) Phylogenetic Tree(s): OG_06_0000155_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082240.1.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT2G17070 No alias Arabidopsis protein of unknown function (DUF241) 0.03 Archaeplastida
AT2G17080 No alias Arabidopsis protein of unknown function (DUF241) 0.03 Archaeplastida
GSVIVT01004309001 No alias No description available 0.03 Archaeplastida
GSVIVT01004310001 No alias No description available 0.03 Archaeplastida
LOC_Os08g43920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g083090.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g032230.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003978_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021827_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004320 DUF241_pln 6 227
No external refs found!