Solyc04g082440.4.1

Description : U-box domain-containing protein 15 OS=Arabidopsis thaliana (sp|q681n2|pub15_arath : 655.0)

Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0006387 (SeedPlants) Phylogenetic Tree(s): OG_06_0006387_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g082440.4.1
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00030110	evm_27.TU.AmTr_v1...	U-box domain-containing protein 15 OS=Arabidopsis thaliana	0.09	Archaeplastida
AMTR_s00072p00171260	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AT1G23030	No alias	ARM repeat superfamily protein	0.04	Archaeplastida
AT5G01830	No alias	ARM repeat superfamily protein	0.02	Archaeplastida
AT5G42340	PUB15	Plant U-Box 15	0.06	Archaeplastida
GSVIVT01007275001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
GSVIVT01016225001	No alias	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01021265001	No alias	U-box domain-containing protein 17 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01023893001	No alias	U-box domain-containing protein 15 OS=Arabidopsis thaliana	0.03	Archaeplastida
Gb_10627	No alias	U-box domain-containing protein 13 OS=Arabidopsis...	0.04	Archaeplastida
Gb_12875	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
Gb_13754	No alias	E3 ubiquitin ligase (PUB)	0.04	Archaeplastida
Gb_29276	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
LOC_Os01g60860.1	No alias	U-box domain-containing protein 16 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os02g13960.1	No alias	U-box domain-containing protein 4 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os06g51130.1	No alias	U-box domain-containing protein 15 OS=Arabidopsis...	0.04	Archaeplastida
LOC_Os08g37570.1	No alias	U-box domain-containing protein 15 OS=Arabidopsis...	0.05	Archaeplastida
LOC_Os12g38210.1	No alias	E3 ubiquitin ligase (PUB)	0.02	Archaeplastida
Pp3c10_4480V3.1	No alias	plant U-box 13	0.03	Archaeplastida
Pp3c13_16440V3.1	No alias	plant U-box 13	0.03	Archaeplastida
Pp3c23_8770V3.1	No alias	plant U-box 14	0.04	Archaeplastida
Pp3c9_17047V3.1	No alias	plant U-box 13	0.02	Archaeplastida
Smo415326	No alias	U-box domain-containing protein 1 OS=Medicago truncatula	0.02	Archaeplastida
Smo75609	No alias	U-box domain-containing protein 1 OS=Medicago truncatula	0.02	Archaeplastida
Solyc11g066040.2.1	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
Zm00001e003398_P001	No alias	U-box domain-containing protein 15 OS=Arabidopsis...	0.05	Archaeplastida
Zm00001e014566_P002	No alias	E3 ubiquitin ligase (PUB)	0.03	Archaeplastida
Zm00001e031915_P001	No alias	U-box domain-containing protein 16 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	274	344
IPR000225	Armadillo	397	436
IPR000225	Armadillo	480	518

External Links

No external refs found!

Solyc04g082440.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation