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  5. Solyc04g082440.4.1

Solyc04g082440.4.1


Description : U-box domain-containing protein 15 OS=Arabidopsis thaliana (sp|q681n2|pub15_arath : 655.0)


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0006387 (SeedPlants) Phylogenetic Tree(s): OG_06_0006387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082440.4.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 evm_27.TU.AmTr_v1... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.09 Archaeplastida
AMTR_s00072p00171260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT1G23030 No alias ARM repeat superfamily protein 0.04 Archaeplastida
AT5G01830 No alias ARM repeat superfamily protein 0.02 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.06 Archaeplastida
GSVIVT01007275001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01016225001 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01023893001 No alias U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.04 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g13960.1 No alias U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os06g51130.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os08g37570.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os12g38210.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.03 Archaeplastida
Pp3c13_16440V3.1 No alias plant U-box 13 0.03 Archaeplastida
Pp3c23_8770V3.1 No alias plant U-box 14 0.04 Archaeplastida
Pp3c9_17047V3.1 No alias plant U-box 13 0.02 Archaeplastida
Smo415326 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.02 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.02 Archaeplastida
Solyc11g066040.2.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e003398_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 274 344
IPR000225 Armadillo 397 436
IPR000225 Armadillo 480 518
No external refs found!