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Description : E3 ubiquitin ligase (PUB)
Gene families : OG0001274 (Archaeplastida) Phylogenetic Tree(s): OG0001274_tree ,
OG_05_0002218 (LandPlants) Phylogenetic Tree(s): OG_05_0002218_tree ,
OG_06_0003881 (SeedPlants) Phylogenetic Tree(s): OG_06_0003881_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g082570.3.1 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00044p00145170 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | Archaeplastida | |
| AT1G20780 | PUB44, SAUL1, ATPUB44 | senescence-associated E3 ubiquitin ligase 1 | 0.05 | Archaeplastida | |
| AT1G68940 | No alias | Armadillo/beta-catenin-like repeat family protein | 0.03 | Archaeplastida | |
| AT1G76390 | No alias | ARM repeat superfamily protein | 0.04 | Archaeplastida | |
| GSVIVT01010123001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| GSVIVT01013395001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| GSVIVT01024723001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | Archaeplastida | |
| Gb_23646 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida | |
| LOC_Os03g45420.1 | No alias | E3 ubiquitin ligase (PUB) | 0.06 | Archaeplastida | |
| LOC_Os06g16410.1 | No alias | E3 ubiquitin ligase (PUB) | 0.07 | Archaeplastida | |
| LOC_Os12g17880.1 | No alias | E3 ubiquitin ligase (PUB) | 0.07 | Archaeplastida | |
| LOC_Os12g17900.1 | No alias | E3 ubiquitin ligase (PUB) | 0.04 | Archaeplastida | |
| Pp3c9_2300V3.1 | No alias | ARM repeat superfamily protein | 0.05 | Archaeplastida | |
| Zm00001e023512_P001 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida | |
| Zm00001e039535_P001 | No alias | E3 ubiquitin ligase (PUB) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Neighborhood |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
| BP | GO:0008037 | cell recognition | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Neighborhood |
| MF | GO:0015928 | fucosidase activity | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Neighborhood |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0040008 | regulation of growth | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
| BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003613 | Ubox_domain | 31 | 105 |
| No external refs found! |