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  5. Solyc04g082710.4.1

Solyc04g082710.4.1


Description : protease (Papain). Prgrammed Cell Death cysteine protease (XCP)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0003937 (SeedPlants) Phylogenetic Tree(s): OG_06_0003937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082710.4.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165270 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
AMTR_s00022p00166050 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.08 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.07 Archaeplastida
AT4G36880 CP1 cysteine proteinase1 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.03 Archaeplastida
Cre05.g247851 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre09.g407700 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01013420001 No alias Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020697001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01023863001 No alias Protein degradation.peptidase families.cysteine-type... 0.08 Archaeplastida
Gb_10444 No alias protease (Papain) 0.02 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
LOC_Os04g57440.1 No alias Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.06 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.02 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_247624g0010 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.06 Archaeplastida
MA_36514g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c23_20820V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.05 Archaeplastida
Solyc04g078540.4.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Zm00001e021469_P001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.1 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 49 105
IPR000668 Peptidase_C1A_C 138 353
No external refs found!