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  5. Solyc04g082760.3.1

Solyc04g082760.3.1


Description : component BAF255/170 of chromatin remodeling complex


Gene families : OG0000902 (Archaeplastida) Phylogenetic Tree(s): OG0000902_tree ,
OG_05_0002793 (LandPlants) Phylogenetic Tree(s): OG_05_0002793_tree ,
OG_06_0007321 (SeedPlants) Phylogenetic Tree(s): OG_06_0007321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082760.3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00224780 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
AMTR_s00059p00072490 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
Cpa|evm.model.tig00000388.52 No alias Chromatin organisation.chromatin remodeling... 0.01 Archaeplastida
Cre08.g364050 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01013428001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01031951001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
LOC_Os04g01970.1 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
LOC_Os04g40420.1 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Pp3c16_6830V3.1 No alias DNA-binding family protein 0.02 Archaeplastida
Pp3c25_660V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Pp3c2_24980V3.1 No alias switch subunit 3 0.04 Archaeplastida
Zm00001e005514_P001 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Zm00001e012143_P002 No alias component BAF255/170 of chromatin remodeling complex 0.05 Archaeplastida
Zm00001e024548_P001 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Zm00001e025044_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007526 SWIRM 75 160
IPR001005 SANT/Myb 255 298
No external refs found!