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  5. Solyc04g082800.3.1

Solyc04g082800.3.1


Description : no hits & (original description: none)


Gene families : OG0008805 (Archaeplastida) Phylogenetic Tree(s): OG0008805_tree ,
OG_05_0009252 (LandPlants) Phylogenetic Tree(s): OG_05_0009252_tree ,
OG_06_0010486 (SeedPlants) Phylogenetic Tree(s): OG_06_0010486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082800.3.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00136750 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
MA_9597g0030 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
CC GO:0070469 respiratory chain IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0071569 protein ufmylation IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
BP GO:1905037 autophagosome organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!