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  4. Sequence
  5. Solyc05g005010.3.1

Solyc05g005010.3.1


Description : no hits & (original description: none)


Gene families : OG0000377 (Archaeplastida) Phylogenetic Tree(s): OG0000377_tree ,
OG_05_0000243 (LandPlants) Phylogenetic Tree(s): OG_05_0000243_tree ,
OG_06_0002466 (SeedPlants) Phylogenetic Tree(s): OG_06_0002466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g005010.3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00085p00068770 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00120p00051630 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G10750 No alias Protein of Unknown Function (DUF239) 0.07 Archaeplastida
AT1G23340 No alias Protein of Unknown Function (DUF239) 0.04 Archaeplastida
AT1G55360 No alias Protein of Unknown Function (DUF239) 0.04 Archaeplastida
AT1G70550 No alias Protein of Unknown Function (DUF239) 0.07 Archaeplastida
AT5G50150 No alias Protein of Unknown Function (DUF239) 0.1 Archaeplastida
GSVIVT01006653001 No alias No description available 0.04 Archaeplastida
GSVIVT01007693001 No alias No description available 0.1 Archaeplastida
GSVIVT01025471001 No alias No description available 0.04 Archaeplastida
LOC_Os03g59240.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g07764.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g28000.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g10530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g45170.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_1134g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c6_29500V3.1 No alias Protein of Unknown Function (DUF239) 0.02 Archaeplastida
Solyc06g071590.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e006081_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e016772_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e020747_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e033077_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004314 Neprosin 211 434
IPR025521 Neprosin_propep 92 198
No external refs found!