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  5. Solyc05g005100.4.1

Solyc05g005100.4.1


Description : Protein trichome birefringence-like 2 OS=Arabidopsis thaliana (sp|q8vyr3|tbl2_arath : 540.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g005100.4.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00162030 No alias Protein trichome birefringence OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_12396 No alias Protein trichome birefringence OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_23719 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida
LOC_Os01g65800.1 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c5_27320V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Archaeplastida
Pp3c7_1960V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Archaeplastida
Zm00001e006156_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004181 metallocarboxypeptidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008235 metalloexopeptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 2 29
IPR026057 PC-Esterase 30 311
No external refs found!