AMTR_s00025p00134170 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.137

Description : Solute transport.carrier-mediated transport.CPA superfamily.CPA-1 family.proton:sodium cation antiporter (NHX-type)

Gene families : OG0001031 (Archaeplastida) Phylogenetic Tree(s): OG0001031_tree ,
OG_05_0000801 (LandPlants) Phylogenetic Tree(s): OG_05_0000801_tree ,
OG_06_0000803 (SeedPlants) Phylogenetic Tree(s): OG_06_0000803_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AMTR_s00025p00134170
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000002001 No alias Solute transport.carrier-mediated transport.CPA... 0.02 Archaeplastida
GSVIVT01037753001 No alias Solute transport.carrier-mediated transport.CPA... 0.01 Archaeplastida
LOC_Os11g42790.1 No alias proton:sodium cation antiporter (NHX) 0.03 Archaeplastida
Zm00001e036920_P002 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA Interproscan
MF GO:0015299 solute:proton antiporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 30 414
No external refs found!