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  5. Solyc05g005790.4.1

Solyc05g005790.4.1


Description : RING-H2 finger protein ATL46 OS=Arabidopsis thaliana (sp|q9fl07|atl46_arath : 82.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0005078 (SeedPlants) Phylogenetic Tree(s): OG_06_0005078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g005790.4.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT4G17245 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT4G18110 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.01 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_772565g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp1g19680.1 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp4g04600.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!