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  5. Solyc05g006325.1.1

Solyc05g006325.1.1


Description : no hits & (original description: none)


Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g006325.1.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Solyc01g066065.1.1 No alias No annotation 0.06 Archaeplastida
Solyc02g050263.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g034394.1.1 No alias No annotation 0.06 Archaeplastida
Solyc03g083965.1.1 No alias No annotation 0.06 Archaeplastida
Solyc04g017625.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc05g051385.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g009015.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Solyc06g048943.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc07g015873.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida
Solyc07g018027.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g019433.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Solyc07g061895.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g065163.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Solyc08g066927.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc09g042725.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc10g051255.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc10g076435.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc10g085205.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc12g062203.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!