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  5. Solyc05g006500.4.1

Solyc05g006500.4.1


Description : Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana (sp|p92998|gl11_arath : 206.0)


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0008048 (SeedPlants) Phylogenetic Tree(s): OG_06_0008048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g006500.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241260 evm_27.TU.AmTr_v1... Germin-like protein 3-7 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00067p00014150 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00089p00119070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00121240 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.06 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00089p00127600 evm_27.TU.AmTr_v1... Germin-like protein 8-2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00114p00037920 evm_27.TU.AmTr_v1... Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00794p00001640 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G18970 GLP4 germin-like protein 4 0.05 Archaeplastida
AT1G74820 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT3G05930 GLP8 germin-like protein 8 0.03 Archaeplastida
AT3G05950 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT3G10080 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT3G62020 GLP10 germin-like protein 10 0.21 Archaeplastida
AT4G14630 GLP9 germin-like protein 9 0.06 Archaeplastida
AT5G26700 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT5G38910 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT5G39110 No alias RmlC-like cupins superfamily protein 0.05 Archaeplastida
AT5G39120 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G39150 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G39180 No alias RmlC-like cupins superfamily protein 0.04 Archaeplastida
AT5G39190 GER2, ATGER2, GLP2A germin-like protein 2 0.03 Archaeplastida
GSVIVT01000061001 No alias No description available 0.13 Archaeplastida
GSVIVT01000062001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000063001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000067001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000068001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000070001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.15 Archaeplastida
GSVIVT01000097001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01000098001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000101001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000103001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01020142001 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01028220001 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.14 Archaeplastida
GSVIVT01028222001 No alias Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01031080001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.15 Archaeplastida
Gb_05078 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_07519 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_10684 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_17655 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Gb_18427 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.05 Archaeplastida
Gb_18428 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_27049 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.02 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g14670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.09 Archaeplastida
LOC_Os02g29000.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g44880.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g48760.1 No alias Putative germin-like protein 3-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g48770.1 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g48780.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g58980.1 No alias Germin-like protein 3-7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g52720.1 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os05g19670.1 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g08980.1 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09000.1 No alias Germin-like protein 8-6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09010.1 No alias Germin-like protein 8-7 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g09020.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09040.1 No alias Germin-like protein 8-9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g35750.1 No alias Germin-like protein 8-13 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os08g35760.1 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
LOC_Os12g05840.1 No alias Germin-like protein 12-1 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
LOC_Os12g05860.1 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os12g05870.1 No alias Putative germin-like protein 12-3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os12g05880.1 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10255546g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10320441g0010 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10386538g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10436609g0010 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 Archaeplastida
MA_42727g0010 No alias Germin-like protein 3-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_43266g0010 No alias Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_7641850g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_828526g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8404570g0010 No alias Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.03 Archaeplastida
MA_90878g0010 No alias Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_926447g0010 No alias Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp2g01610.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01630.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g01660.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g02530.1 No alias Oxalate oxidase 2 OS=Hordeum vulgare... 0.03 Archaeplastida
Mp5g16550.1 No alias Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp5g23430.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g23510.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.04 Archaeplastida
Mp8g18120.1 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Pp3c10_21090V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c14_2830V3.1 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
Pp3c23_1340V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c23_1379V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Pp3c3_16510V3.1 No alias germin-like protein subfamily 2 member 2 precursor 0.03 Archaeplastida
Smo103237 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo109968 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo109995 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo153258 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo92738 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g088260.3.1 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Solyc01g088275.1.1 No alias Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Solyc01g102390.4.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.03 Archaeplastida
Solyc01g102890.4.1 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc01g102895.1.1 No alias Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g006980.1.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e005327_P001 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e013714_P001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e014725_P001 No alias Germin-like protein 2-4 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Zm00001e017425_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e021630_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021632_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e021634_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e021636_P002 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021637_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e021638_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e024710_P001 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e025458_P001 No alias Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e039952_P001 No alias Putative germin-like protein 12-4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e039953_P001 No alias Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e039958_P001 No alias Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e040617_P001 No alias Germin-like protein 8-12 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 76 210
No external refs found!