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  4. Sequence
  5. Solyc05g007245.1.1

Solyc05g007245.1.1


Description : no hits & (original description: none)


Gene families : OG0000447 (Archaeplastida) Phylogenetic Tree(s): OG0000447_tree ,
OG_05_0000229 (LandPlants) Phylogenetic Tree(s): OG_05_0000229_tree ,
OG_06_0000098 (SeedPlants) Phylogenetic Tree(s): OG_06_0000098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007245.1.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Solyc01g150104.1.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Solyc03g005393.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc03g033295.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g075012.1.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc04g075014.1.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Solyc05g021410.3.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Solyc08g004000.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc09g009583.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc12g150106.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!