Solyc05g007420.2.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0086568 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007420.2.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.03 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.05 Archaeplastida
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Archaeplastida
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.07 Archaeplastida
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Gb_23937 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_34229 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os01g69980.1 No alias transcription factor (TCP). TCP20 circadian clock... 0.02 Archaeplastida
LOC_Os02g42380.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os04g44440.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os11g07460.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os12g07480.1 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_10428794g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_96244g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Pp3c10_20400V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Archaeplastida
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
Solyc01g103780.4.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc11g020670.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e015821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e016271_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.02 Archaeplastida
Zm00001e030854_P001 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 28 188
No external refs found!