Description : RING-v-class E3 ligase

Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0000506 (LandPlants) Phylogenetic Tree(s): OG_05_0000506_tree ,
OG_06_0001067 (SeedPlants) Phylogenetic Tree(s): OG_06_0001067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc05g007660.2.1
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030910001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Mp8g15410.1 No alias RING-v-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR022143 DUF3675 114 232
IPR011016 Znf_RING-CH 63 108
No external refs found!