Description : transcription factor (mTERF)
Gene families : OG0001474 (Archaeplastida) Phylogenetic Tree(s): OG0001474_tree ,
OG_05_0001013 (LandPlants) Phylogenetic Tree(s): OG_05_0001013_tree ,
OG_06_0001081 (SeedPlants) Phylogenetic Tree(s): OG_06_0001081_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc05g007840.3.1 | |
Cluster | HCCA: Cluster_211 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00030p00229610 | evm_27.TU.AmTr_v1... | RNA biosynthesis.organelle... | 0.02 | Archaeplastida | |
AMTR_s00058p00057440 | evm_27.TU.AmTr_v1... | RNA biosynthesis.organelle... | 0.03 | Archaeplastida | |
AT2G36000 | No alias | Mitochondrial transcription termination factor family protein | 0.03 | Archaeplastida | |
GSVIVT01031956001 | No alias | RNA biosynthesis.organelle... | 0.03 | Archaeplastida | |
Gb_04089 | No alias | transcription factor (mTERF) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0001882 | nucleoside binding | IEP | Neighborhood |
MF | GO:0001883 | purine nucleoside binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0005525 | GTP binding | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0016874 | ligase activity | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
MF | GO:0032549 | ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003690 | MTERF | 149 | 301 |
No external refs found! |