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  5. Solyc05g007940.3.1

Solyc05g007940.3.1


Description : Intracellular ribonuclease LX OS=Solanum lycopersicum (sp|p80196|rnlx_sollc : 409.0)


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0002586 (SeedPlants) Phylogenetic Tree(s): OG_06_0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g007940.3.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.04 Archaeplastida
AT1G26820 RNS3 ribonuclease 3 0.1 Archaeplastida
Cre03.g160953 No alias No description available 0.02 Archaeplastida
Gb_05908 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_30836 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g43600.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.02 Archaeplastida
LOC_Os07g43670.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g33710.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.03 Archaeplastida
MA_10433186g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8445917g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9272140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9482356g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95383g0020 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp2g08570.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo270532 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.02 Archaeplastida
Zm00001e004122_P001 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 28 210
No external refs found!