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  5. Solyc05g008060.4.1

Solyc05g008060.4.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008060.4.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00137670 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.08 Archaeplastida
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.06 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.1 Archaeplastida
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.07 Archaeplastida
Gb_29191 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os11g04190.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_61553g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
MA_61553g0020 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Mp5g05140.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.03 Archaeplastida
Smo119024 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Solyc01g068410.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
Solyc04g007690.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e018835_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e023910_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e036414_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 8 549
No external refs found!