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  5. Solyc05g008320.1.1

Solyc05g008320.1.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0008397 (Archaeplastida) Phylogenetic Tree(s): OG0008397_tree ,
OG_05_0007397 (LandPlants) Phylogenetic Tree(s): OG_05_0007397_tree ,
OG_06_0012167 (SeedPlants) Phylogenetic Tree(s): OG_06_0012167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g008320.1.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00053270 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01011560001 No alias No description available 0.12 Archaeplastida
GSVIVT01011561001 No alias No description available 0.11 Archaeplastida
GSVIVT01011570001 No alias No description available 0.12 Archaeplastida
Zm00001e030009_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 218 325
No external refs found!