Solyc05g008460.4.1

Description : subunit beta of ATP synthase peripheral MF1 subcomplex

Gene families : OG0000722 (Archaeplastida) Phylogenetic Tree(s): OG0000722_tree ,
OG_05_0002993 (LandPlants) Phylogenetic Tree(s): OG_05_0002993_tree ,
OG_06_0003322 (SeedPlants) Phylogenetic Tree(s): OG_06_0003322_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g008460.4.1
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00059970	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative phosphorylation.ATP...	0.03	Archaeplastida
AT5G08670	No alias	ATP synthase alpha/beta family protein	0.2	Archaeplastida
AT5G08680	No alias	ATP synthase alpha/beta family protein	0.18	Archaeplastida
AT5G08690	No alias	ATP synthase alpha/beta family protein	0.19	Archaeplastida
Cpa\|evm.model.tig00001376.3	No alias	ATP synthase subunit beta, mitochondrial...	0.04	Archaeplastida
Cre17.g698000	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.11	Archaeplastida
GSVIVT01008378001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.05	Archaeplastida
GSVIVT01011797001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.09	Archaeplastida
Gb_07287	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.05	Archaeplastida
LOC_Os01g49190.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.11	Archaeplastida
LOC_Os05g47980.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.15	Archaeplastida
MA_11179g0010	No alias	ATP synthase subunit beta, mitochondrial OS=Nicotiana...	0.05	Archaeplastida
Mp2g15450.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.13	Archaeplastida
Pp3c5_26350V3.1	No alias	ATP synthase alpha/beta family protein	0.04	Archaeplastida
Pp3c6_4230V3.1	No alias	ATP synthase alpha/beta family protein	0.08	Archaeplastida
Smo139657	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.1	Archaeplastida
Zm00001e020138_P001	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.04	Archaeplastida
Zm00001e026462_P001	No alias	No annotation	0.17	Archaeplastida
Zm00001e032346_P003	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.18	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009126	purine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009161	ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015672	monovalent inorganic cation transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044429	mitochondrial part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044455	mitochondrial membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Neighborhood
CC	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Neighborhood
MF	GO:0004489	methylenetetrahydrofolate reductase (NAD(P)H) activity	IEP	Neighborhood
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Neighborhood
MF	GO:0004618	phosphoglycerate kinase activity	IEP	Neighborhood
MF	GO:0004827	proline-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
BP	GO:0006096	glycolytic process	IEP	Neighborhood
BP	GO:0006098	pentose-phosphate shunt	IEP	Neighborhood
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Neighborhood
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006520	cellular amino acid metabolic process	IEP	Neighborhood
BP	GO:0006555	methionine metabolic process	IEP	Neighborhood
BP	GO:0006732	coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006739	NADP metabolic process	IEP	Neighborhood
BP	GO:0006757	ATP generation from ADP	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009108	coenzyme biosynthetic process	IEP	Neighborhood
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009166	nucleotide catabolic process	IEP	Neighborhood
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
MF	GO:0019829	cation-transporting ATPase activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030126	COPI vesicle coat	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Neighborhood
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
MF	GO:0036442	proton-exporting ATPase activity	IEP	Neighborhood
MF	GO:0042623	ATPase activity, coupled	IEP	Neighborhood
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
BP	GO:0042866	pyruvate biosynthetic process	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046031	ADP metabolic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Neighborhood
BP	GO:0046939	nucleotide phosphorylation	IEP	Neighborhood
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Neighborhood
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Neighborhood
BP	GO:0051186	cofactor metabolic process	IEP	Neighborhood
BP	GO:0051188	cofactor biosynthetic process	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
MF	GO:1901681	sulfur compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	212	433
IPR004100	ATPase_F1/V1/A1_a/bsu_N	89	155
IPR020971	ATP_synth_F1_beta_su	1	46

External Links

No external refs found!

Solyc05g008460.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation