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  5. Solyc05g009380.4.1

Solyc05g009380.4.1


Description : Zinc finger protein JAGGED OS=Arabidopsis thaliana (sp|q6s591|jag_arath : 111.0)


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0003497 (SeedPlants) Phylogenetic Tree(s): OG_06_0003497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009380.4.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00022p00139230 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.04 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.05 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.08 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.02 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.04 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT3G23140 URO C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G06650 GIS2 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
GSVIVT01028555001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01037897001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
Gb_15338 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os02g01090.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g08600.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_110160g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_113057g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_77993g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Mp3g23440.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g061870.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e005916_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e012453_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e025728_P002 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!