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  5. Solyc05g009640.4.1

Solyc05g009640.4.1


Description : transcription factor (bHLH)


Gene families : OG0001334 (Archaeplastida) Phylogenetic Tree(s): OG0001334_tree ,
OG_05_0001220 (LandPlants) Phylogenetic Tree(s): OG_05_0001220_tree ,
OG_06_0086599 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g009640.4.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT4G37850 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01003697001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.09 Archaeplastida
Gb_10697 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os12g43620.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.05 Archaeplastida
MA_50811g0010 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 Archaeplastida
Pp3c11_21970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c7_7950V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_18600V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Solyc02g091810.2.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.05 Archaeplastida
Zm00001e002570_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005177_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e012122_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 82 127
No external refs found!