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  5. Solyc05g011887.1.1

Solyc05g011887.1.1


Description : No annotation


Gene families : OG0000246 (Archaeplastida) Phylogenetic Tree(s): OG0000246_tree ,
OG_05_0000146 (LandPlants) Phylogenetic Tree(s): OG_05_0000146_tree ,
OG_06_0000059 (SeedPlants) Phylogenetic Tree(s): OG_06_0000059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g011887.1.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007541001 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.02 Archaeplastida
GSVIVT01008147001 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.04 Archaeplastida
LOC_Os10g11270.1 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!