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  5. Solyc05g012000.3.1

Solyc05g012000.3.1


Description : no hits & (original description: none)


Gene families : OG0001471 (Archaeplastida) Phylogenetic Tree(s): OG0001471_tree ,
OG_05_0001167 (LandPlants) Phylogenetic Tree(s): OG_05_0001167_tree ,
OG_06_0002215 (SeedPlants) Phylogenetic Tree(s): OG_06_0002215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g012000.3.1
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AT1G69080 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Archaeplastida
AT2G03720 MRH6 Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 Archaeplastida
GSVIVT01008879001 No alias No description available 0.03 Archaeplastida
Gb_02713 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_28666g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_48816g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_9455524g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039611_P004 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR006016 UspA 61 213
No external refs found!