1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g012840.1.1

Solyc05g012840.1.1


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g012840.1.1
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00072430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
MA_547683g0010 No alias transcription factor (TCP) 0.02 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Zm00001e011911_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e016465_P003 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 22 116
No external refs found!