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  5. Solyc05g013700.4.1

Solyc05g013700.4.1


Description : mRNA unwinding factor (eIF4B)


Gene families : OG0001866 (Archaeplastida) Phylogenetic Tree(s): OG0001866_tree ,
OG_05_0001421 (LandPlants) Phylogenetic Tree(s): OG_05_0001421_tree ,
OG_06_0001509 (SeedPlants) Phylogenetic Tree(s): OG_06_0001509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013700.4.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00018640 evm_27.TU.AmTr_v1... Protein biosynthesis.translation initiation.mRNA... 0.05 Archaeplastida
AT1G13020 EIF4B2 eukaryotic initiation factor 4B2 0.09 Archaeplastida
AT3G26400 EIF4B1 eukaryotic translation initiation factor 4B1 0.09 Archaeplastida
AT4G38710 No alias glycine-rich protein 0.03 Archaeplastida
LOC_Os04g40400.1 No alias mRNA unwinding factor (eIF4B) 0.03 Archaeplastida
Pp3c3_35640V3.1 No alias eukaryotic translation initiation factor 4B1 0.03 Archaeplastida
Smo422547 No alias Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum 0.03 Archaeplastida
Zm00001e041080_P001 No alias mRNA unwinding factor (eIF4B) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR010433 EIF-4B_pln 1 505
IPR010433 EIF-4B_pln 507 551
No external refs found!