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  5. Solyc05g013930.2.1

Solyc05g013930.2.1


Description : Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0)


Gene families : OG0001662 (Archaeplastida) Phylogenetic Tree(s): OG0001662_tree ,
OG_05_0001155 (LandPlants) Phylogenetic Tree(s): OG_05_0001155_tree ,
OG_06_0000931 (SeedPlants) Phylogenetic Tree(s): OG_06_0000931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g013930.2.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.11 Archaeplastida
AT1G67770 TEL2 terminal EAR1-like 2 0.09 Archaeplastida
AT3G26120 TEL1 terminal EAR1-like 1 0.03 Archaeplastida
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.08 Archaeplastida
GSVIVT01003988001 No alias Protein terminal ear1 OS=Zea mays 0.12 Archaeplastida
Gb_20291 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_21853 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.06 Archaeplastida
Gb_33381 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 198.0) 0.03 Archaeplastida
LOC_Os01g68000.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os09g36140.1 No alias Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
MA_477594g0010 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_68449g0010 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.05 Archaeplastida
Mp1g04100.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 Archaeplastida
Pp3c15_22650V3.1 No alias terminal EAR1-like 1 0.02 Archaeplastida
Pp3c9_23750V3.1 No alias terminal EAR1-like 1 0.02 Archaeplastida
Zm00001e018912_P001 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 435 545
IPR000504 RRM_dom 205 269
No external refs found!